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bids/hcppipelines:v3.17.0-1

Manifest digest

sha256:81852e3ba5026dda2ccf6047cc50a65e4a24570ed825e92f85cd731c95fed72c

OS/ARCH

linux/amd64

Compressed size

3.77 GB

Last pushed

about 10 years by filo

Type

Image

Manifest digest

sha256:81852e3ba5026dda2ccf6047cc50a65e4a24570ed825e92f85cd731c95fed72c

Image Layers

Image Layers

1MAINTAINER https://github.com/CentOS/sig-cloud-instance-images0 B
2ADD file ... in /65.58 MB
3LABEL name=CentOS Base Image vendor=CentOS0 B
4CMD ["/bin/bash"]0 B
5/bin/sh -c yum -y install1.95 GB
6/bin/sh -c /bin/bash -c 'touch151 B
7ENV OS=Linux0 B
8ENV FS_OVERRIDE=00 B
9ENV FIX_VERTEX_AREA=0 B
10ENV SUBJECTS_DIR=/opt/freesurfer/subjects0 B
11ENV FSF_OUTPUT_FORMAT=nii.gz0 B
12ENV MNI_DIR=/opt/freesurfer/mni0 B
13ENV LOCAL_DIR=/opt/freesurfer/local0 B
14ENV FREESURFER_HOME=/opt/freesurfer0 B
15ENV FSFAST_HOME=/opt/freesurfer/fsfast0 B
16ENV MINC_BIN_DIR=/opt/freesurfer/mni/bin0 B
17ENV MINC_LIB_DIR=/opt/freesurfer/mni/lib0 B
18ENV MNI_DATAPATH=/opt/freesurfer/mni/data0 B
19ENV FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B
20ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
21ENV MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
22ENV PATH=/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
23/bin/sh -c wget http://fsl.fmrib.ox.ac.uk/fsldownloads/oldversions/fsl-5.0.6-centos6_64.tar.gz &&1.47 GB
24ENV FSLDIR=/usr/local/fsl/0 B
25ENV FSL_DIR=/usr/local/fsl/0 B
26ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
27ENV PATH=/usr/local/fsl/bin:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
28ENV FSLMULTIFILEQUIT=TRUE0 B
29ENV POSSUMDIR=/usr/local/fsl0 B
30ENV FSLTCLSH=/usr/bin/local/bin/tclsh0 B
31ENV FSLWISH=/usr/bin/local/bin/wish0 B
32ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
33/bin/sh -c yum -y install7.76 MB
34/bin/sh -c wget https://ftp.humanconnectome.org/workbench/workbench-rh_linux64-v1.2.3.zip -O81.64 MB
35ENV PATH=/opt/workbench/bin_rh_linux64:/usr/local/fsl/bin:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
36ENV CARET7DIR=/opt/workbench/bin_rh_linux640 B
37/bin/sh -c wget https://github.com/Washington-University/Pipelines/archive/v3.17.0.tar.gz -O201.75 MB
38ENV HCPPIPEDIR=/opt/HCP-Pipelines0 B
39ENV HCPPIPEDIR_Templates=/opt/HCP-Pipelines/global/templates0 B
40ENV HCPPIPEDIR_Bin=/opt/HCP-Pipelines/global/binaries0 B
41ENV HCPPIPEDIR_Config=/opt/HCP-Pipelines/global/config0 B
42ENV HCPPIPEDIR_PreFS=/opt/HCP-Pipelines/PreFreeSurfer/scripts0 B
43ENV HCPPIPEDIR_FS=/opt/HCP-Pipelines/FreeSurfer/scripts0 B
44ENV HCPPIPEDIR_PostFS=/opt/HCP-Pipelines/PostFreeSurfer/scripts0 B
45ENV HCPPIPEDIR_fMRISurf=/opt/HCP-Pipelines/fMRISurface/scripts0 B
46ENV HCPPIPEDIR_fMRIVol=/opt/HCP-Pipelines/fMRIVolume/scripts0 B
47ENV HCPPIPEDIR_tfMRI=/opt/HCP-Pipelines/tfMRI/scripts0 B
48ENV HCPPIPEDIR_dMRI=/opt/HCP-Pipelines/DiffusionPreprocessing/scripts0 B
49ENV HCPPIPEDIR_dMRITract=/opt/HCP-Pipelines/DiffusionTractography/scripts0 B
50ENV HCPPIPEDIR_Global=/opt/HCP-Pipelines/global/scripts0 B
51ENV HCPPIPEDIR_tfMRIAnalysis=/opt/HCP-Pipelines/TaskfMRIAnalysis/scripts0 B
52ENV MSMBin=/opt/HCP-Pipelines/MSMBinaries0 B

Command

MAINTAINER https://github.com/CentOS/sig-cloud-instance-images