chrisamiller/minivars:0.1

Multi-platform

Index digest

sha256:bb09516732e5dcd1107da7a7cdfec00f5eb8879d85687d9a95b57cd346800821

OS/ARCH

Compressed size

163.5 MB

Last pushed

13 days by chrisamiller

Type

Image

Manifest digest

sha256:4c4a44ef4c467ebefc15cace7097fa32e7aae6b62bdd7030e2fc1bae04d6620b

Image Layers

Image Layers

1ADD file ... in / 27.81 MB

2CMD ["bash"]0 B

3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

4ENV ENV_NAME=base0 B

5ENV MAMBA_ROOT_PREFIX=/opt/conda0 B

6ENV MAMBA_EXE=/bin/micromamba0 B

7COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit119.8 KB

8COPY /tmp/bin/micromamba /bin/micromamba # buildkit7.51 MB

9RUN /bin/sh -c { grep32 B

10ARG MAMBA_USER=mambauser0 B

11ARG MAMBA_USER_ID=574390 B

12ARG MAMBA_USER_GID=574390 B

13ENV MAMBA_USER=mambauser0 B

14ENV MAMBA_USER_ID=574390 B

15ENV MAMBA_USER_GID=574390 B

16COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit522 B

17COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit282 B

18RUN |3 MAMBA_USER=mambauser MAMBA_USER_ID=57439 MAMBA_USER_GID=574393.69 KB

19USER mambauser0 B

20WORKDIR /tmp32 B

21COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit215 B

22COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit684 B

23COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit646 B

24ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B

25CMD ["/bin/bash"]0 B

26COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit345 B

27SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B

28RUN /usr/local/bin/_dockerfile_shell.sh micromamba install -y127.82 MB

29ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

30ADD --chmod=755 https://github.com/brentp/jigv/releases/download/v0.1.12/jigv-linux-x86_64 /usr/local/bin/jigv #240.09 KB

31ENV LD_LIBRARY_PATH=/opt/conda/lib0 B

32COPY --chmod=755 pipeline.sh /usr/local/bin/pipeline.sh #4.43 KB

33COPY TP53.bed /opt/annotation/TP53.bed # buildkit255 B

34ENV GENE_BED=/opt/annotation/TP53.bed0 B

35WORKDIR /data97 B

36CMD ["pipeline.sh" "-h"]0 B

Command

ADD file:06a1877f1e100122a40ed52ce771bfa7e2ab3d28323780f58f1e5b57c1e576f9 in /