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kapsakcj/freyja:1.3.4-micromamba

Manifest digest

sha256:b0efacbc98415ff7655a35b7c790b33ff6ffec499c3d7591773240f4cc8a087e

OS/ARCH

linux/amd64

Compressed size

431.34 MB

Last pushed

over 4 years by kapsakcj

Type

Image

Manifest digest

sha256:b0efacbc98415ff7655a35b7c790b33ff6ffec499c3d7591773240f4cc8a087e

Image Layers

Image Layers

1ADD file ... in / 29.91 MB
2CMD ["bash"]0 B
3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
4ENV ENV_NAME=base0 B
5ENV MAMBA_ROOT_PREFIX=/opt/conda0 B
6ENV MAMBA_EXE=/bin/micromamba0 B
7COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit112.53 KB
8COPY /tmp/bin/micromamba /bin/micromamba # buildkit6.28 MB
9ARG MAMBA_USER=mambauser0 B
10ARG MAMBA_USER_ID=10000 B
11ARG MAMBA_USER_GID=10000 B
12ENV MAMBA_USER=mambauser0 B
13RUN |3 MAMBA_USER=mambauser MAMBA_USER_ID=1000 MAMBA_USER_GID=10004.49 KB
14USER mambauser0 B
15WORKDIR /tmp32 B
16COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit689 B
17COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit441 B
18ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B
19CMD ["/bin/bash"]0 B
20COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit349 B
21SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B
22/usr/local/bin/_dockerfile_shell.sh #(nop) ARG FREYJA_SOFTWARE_VERSION=1.3.40 B
23/usr/local/bin/_dockerfile_shell.sh #(nop) USER root0 B
24/usr/local/bin/_dockerfile_shell.sh #(nop) WORKDIR /0 B
25/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL base.image=mambaorg/micromamba:0.22.00 B
26/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL dockerfile.version=20 B
27/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL software=Freyja0 B
28/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL software.version=1.3.40 B
29/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL description=Freyja0 B
30/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL website=https://github.com/andersen-lab/Freyja0 B
31/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL license=https://github.com/andersen-lab/Freyja/blob/main/LICENSE0 B
32/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL maintainer1=Kevin0 B
33/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL [email protected]0 B
34/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL maintainer2=Kevin0 B
35/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL [email protected]0 B
36|1 FREYJA_SOFTWARE_VERSION=1.3.4 /usr/local/bin/_dockerfile_shell.sh apt-get update1.87 MB
37|1 FREYJA_SOFTWARE_VERSION=1.3.4 /usr/local/bin/_dockerfile_shell.sh micromamba create377.59 MB
38/usr/local/bin/_dockerfile_shell.sh #(nop) ENV PATH=/opt/conda/envs/freyja-env/bin:/opt/conda/envs/env/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
39/usr/local/bin/_dockerfile_shell.sh #(nop) WORKDIR /data127 B
40/usr/local/bin/_dockerfile_shell.sh #(nop) COPY dir:27df4acfe981ba496375682b4cffcf0ceda348a3f23b5bd86d13f29dd8282cdd in15.36 MB
41/usr/local/bin/_dockerfile_shell.sh #(nop) ENV ENV_NAME=freyja-env0 B
42/usr/local/bin/_dockerfile_shell.sh #(nop) ARG MAMBA_DOCKERFILE_ACTIVATE=10 B
43|1 MAMBA_DOCKERFILE_ACTIVATE=1 /usr/local/bin/_dockerfile_shell.sh freyja variants216.29 KB
44|1 MAMBA_DOCKERFILE_ACTIVATE=1 /usr/local/bin/_dockerfile_shell.sh cmp /data/test_variants.tsv0 B
45|1 MAMBA_DOCKERFILE_ACTIVATE=1 /usr/local/bin/_dockerfile_shell.sh grep "Omicron"0 B

Command

ADD file:d48a85028743f16ed927507322e3e3beee187fbfadd0b781d4b89de197c64b5b in /