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soichih/hcppipeline:latest

Manifest digest

sha256:df9724dad2bea6dce47a15ff86b16b9705422e71ba3426ffcfd91396fd501f94

OS/ARCH

linux/amd64

Compressed size

2.58 GB

Last pushed

over 8 years by soichih

Type

Image

Manifest digest

sha256:df9724dad2bea6dce47a15ff86b16b9705422e71ba3426ffcfd91396fd501f94

Image Layers

Image Layers

1ADD file ... in / 62.65 MB
2/bin/sh -c set -xe &&69.88 KB
3/bin/sh -c rm -rf /var/lib/apt/lists/*358 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'681 B
5/bin/sh -c mkdir -p /run/systemd162 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update &&46.9 MB
8/bin/sh -c npm install -g7.55 MB
9/bin/sh -c apt-get -y update1.88 GB
10ENV OS=Linux0 B
11ENV FS_OVERRIDE=00 B
12ENV FIX_VERTEX_AREA=0 B
13ENV SUBJECTS_DIR=/opt/freesurfer/subjects0 B
14ENV FSF_OUTPUT_FORMAT=nii.gz0 B
15ENV MNI_DIR=/opt/freesurfer/mni0 B
16ENV LOCAL_DIR=/opt/freesurfer/local0 B
17ENV FREESURFER_HOME=/opt/freesurfer0 B
18ENV FSFAST_HOME=/opt/freesurfer/fsfast0 B
19ENV MINC_BIN_DIR=/opt/freesurfer/mni/bin0 B
20ENV MINC_LIB_DIR=/opt/freesurfer/mni/lib0 B
21ENV MNI_DATAPATH=/opt/freesurfer/mni/data0 B
22ENV FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B
23ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
24ENV MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
25ENV PATH=/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
26/bin/sh -c apt-get update &&268.01 MB
27ENV FSLDIR=/usr/share/fsl/5.00 B
28ENV FSL_DIR=/usr/share/fsl/5.00 B
29ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
30ENV PATH=/usr/lib/fsl/5.0:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
31ENV FSLMULTIFILEQUIT=TRUE0 B
32ENV POSSUMDIR=/usr/share/fsl/5.00 B
33ENV LD_LIBRARY_PATH=/usr/lib/fsl/5.0:0 B
34ENV FSLTCLSH=/usr/bin/tclsh0 B
35ENV FSLWISH=/usr/bin/wish0 B
36ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
37/bin/sh -c echo "cHJpbnRmICJrcnp5c3p0b2YuZ29yZ29sZXdza2lAZ21haWwuY29tXG41MTcyXG4gKkN2dW12RVYzelRmZ1xuRlM1Si8yYzFhZ2c0RVxuIiA+IC9vcHQvZnJlZXN1cmZlci9saWNlbnNlLnR4dAo=" |229 B
38/bin/sh -c apt-get update &&63.38 MB
39ENV CARET7DIR=/usr/bin0 B
40/bin/sh -c apt-get -y update230.75 MB
41ENV HCPPIPEDIR=/opt/HCP-Pipelines0 B
42ENV HCPPIPEDIR_Templates=/opt/HCP-Pipelines/global/templates0 B
43ENV HCPPIPEDIR_Bin=/opt/HCP-Pipelines/global/binaries0 B
44ENV HCPPIPEDIR_Config=/opt/HCP-Pipelines/global/config0 B
45ENV HCPPIPEDIR_PreFS=/opt/HCP-Pipelines/PreFreeSurfer/scripts0 B
46ENV HCPPIPEDIR_FS=/opt/HCP-Pipelines/FreeSurfer/scripts0 B
47ENV HCPPIPEDIR_PostFS=/opt/HCP-Pipelines/PostFreeSurfer/scripts0 B
48ENV HCPPIPEDIR_fMRISurf=/opt/HCP-Pipelines/fMRISurface/scripts0 B
49ENV HCPPIPEDIR_fMRIVol=/opt/HCP-Pipelines/fMRIVolume/scripts0 B
50ENV HCPPIPEDIR_tfMRI=/opt/HCP-Pipelines/tfMRI/scripts0 B
51ENV HCPPIPEDIR_dMRI=/opt/HCP-Pipelines/DiffusionPreprocessing/scripts0 B
52ENV HCPPIPEDIR_dMRITract=/opt/HCP-Pipelines/DiffusionTractography/scripts0 B
53ENV HCPPIPEDIR_Global=/opt/HCP-Pipelines/global/scripts0 B
54ENV HCPPIPEDIR_tfMRIAnalysis=/opt/HCP-Pipelines/TaskfMRIAnalysis/scripts0 B
55ENV MSMBin=/opt/HCP-Pipelines/MSMBinaries0 B
56/bin/sh -c apt-get update &&41.81 MB
57/bin/sh -c pip install pybids==0.0.1103.16 KB
58ENV PYTHONPATH=0 B
59COPY file:2aa47a267a2c76350d32fdf5feac1785d95a47934aff6eaf09ff44f0e04eb350 in /run.py 5.04 KB
60/bin/sh -c chmod +x /run.py5.04 KB
61COPY file:dd666687506072c7bfa0f21c46e78cd05a476b3adb47b1a5aa0530a96daea621 in /version 106 B
62ENTRYPOINT ["/run.py"]0 B

Command

ADD file:c383f1cde338921411168cc34a10e3a221ae55e569768e1551274f8fddc54415 in /